######## SISUS_v01-07_PhillipsKoch2002_bears.xls :: sheet 1 ########
SISUS Parameters,Settings,Values,Description,Comments 
Analysis Labels,,,,Suggested Filename: SISUS_[version]_[Authors][year]_[MixtureName]_[n]-[k].xls 
analysis.name,Phillips and Koch in Oecologia (2002) p.117 Table 1 Bears (m=3, n=3, k=2) ,long text,name of this analysis to print on plots and tables,Suggested: [Authors] in [Journal] ([year]) p.[page] Table [TableNumber] [MixtureName] (n=[n], k=[k]) 
filename.prefix,PK2002Bears_3-3-2,short string,character string (no spaces) at beginning of all output filenames (if blank, default is \SISUS\),Suggested: [AuthorsInitials][year][MixtureName]_[n]-[k] 
mixtures.group.name,Bears,short string,If n.mixtures > 1, then name the group of mixtures, 
Data Dimensions,,,, 
n.mixtures,3,1 or more,number of mixtures to analyze together, 
n.sources,3,2 or more,n = number of sources composing the mixture, 
n.isotopes,2,1 or more,k = number of isotopes measured, 
Sampling,,,, 
M,10000,1-100000,total number of samples to retain, 
n.samples.isotope.mvn,0,0 or 100ish,number of samples from isotope distribution (if 0 uses given isotope values) (each sample is of size M/n.samples.isotope.mvn), 
skip,100,100,draw [skip] samples from the polytope keeping the last one, 
burnin,10,10,number of samples to draw to get off the boundary of the polytope (there is a check to guarentee off boundary), 
seed,25057,0-100000,random seed (to repeat results), 
Mixing Model,,,, 
simplex.include.sw,1,(1=use, 0=ignore),Include simplex constraint (1=yes, usually estimating proportion of diet; 0=no, estimating fraction source consumed), 
discrimination.include.sw,1,(1=use, 0=ignore),Correct for discrimination using values on Discrimination worksheet (Source Isotopic Values + Discrimination = Mixture Isotopic Value), 
concentration.include.sw,1,(1=use, 0=ignore),Include concentration dependence., 
efficiency.include.sw,0,(1=use, 0=ignore),Include assimilation efficiency., 
lc.include.sw,0,(1=use, 0=ignore),Use defined Linear Constraints, 
prior.include.sw,0,(1=use, 0=ignore),Resample uniform sampe based on defined Dirichlet distribution., 
isotope.stddev.include.sw,0,(1=use, 0=ignore),**Experimental** Isotope standard deviations used to construct multivariate normal distribution, 
concentration.stddev.include.sw,0,(1=use, 0=ignore),**Experimental** Concentration standard deviations used to construct multivariate normal distribution, 
efficiency.stddev.include.sw,0,(1=use, 0=ignore),**Experimental** Assimilation Efficiency standard deviations used to construct multivariate normal distribution, 
time.series.sw,0,(1=use, 0=ignore),Treat multiple mixtures as a series over time, output a csv file of means and stddev, 
Plot Settings,,,, 
hist.bins,10,10,number of bins for histograms in marginal histogram plots, 
Plot Formats,,,, 
plot.type.png,1,(1=produce ,0=don't),produce plots in (.png) Portable Network Graphics format (0=no, 1=yes) (lossless for web) (Always produce), 
plot.type.eps,0,(1=produce ,0=don't),produce plots in (.eps) Encapsulated PostScript format (0=no, 1=yes) (for LaTeX and *nix), 
plot.type.pdf,0,(1=produce ,0=don't),produce plots in (.pdf) Portable Document Format format (0=no, 1=yes) (for pdfLaTeX), 
plot.type.bmp,0,(1=produce ,0=don't),produce plots in (.bmp) Windows and OS/2 bitmap format (0=no, 1=yes) (for Windows), 
plot.type.jpeg,0,(1=produce ,0=don't),produce plots in (.jpeg) Joint Photographic Experts Group format (0=no, 1=yes) (compressed for web), 
plot.type.gif,0,(1=produce ,0=don't),produce plots in (.gif) Graphics Interchange Format (0=no, 1=yes) (compressed), 
plot.type.tiff,0,0 Not Currently Supported,produce plots in (.tiff) Tagged Image File Format (0=no, 1=yes) (uncompressed), 
######## SISUS_v01-07_PhillipsKoch2002_bears.xls :: sheet 2 ########
Mixtures Isotopic Values,d13C,d15N 
BrownSym,-20.30,10.90 
BlackSym,-22.5,4.9 
BlackAllo,-20.1,7.6 
######## SISUS_v01-07_PhillipsKoch2002_bears.xls :: sheet 3 ########
Sources Isotopic Values,d13C,d15N, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0
Salmon,-20.50,13.20,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA
Ter Meat,-21.50,3.90,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA
Ter Plants,-26.60,-0.90,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA
######## SISUS_v01-07_PhillipsKoch2002_bears.xls :: sheet 4 ########
Sources Discrimination,d13C,d15N,0,0,0,0,0,0,0,0,0,0,0,0,0
Salmon,1.20,2.30,0,0,0,0,0,0,0,0,0,0,0,0,0
Ter Meat,4.90,4.00,0,0,0,0,0,0,0,0,0,0,0,0,0
Ter Plants,3.30,4.10,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
0,0.00,0.00,0,0,0,0,0,0,0,0,0,0,0,0,0
######## SISUS_v01-07_PhillipsKoch2002_bears.xls :: sheet 5 ########
Concentration,d13C,d15N,0,0,0,0,0,0,0,0,0,0,0,0,0
Salmon,55.00,12.00,1,1,1,1,1,1,1,1,1,1,1,1,1
Ter Meat,51.50,14.00,1,1,1,1,1,1,1,1,1,1,1,1,1
Ter Plants,44.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
0,1.00,1.00,1,1,1,1,1,1,1,1,1,1,1,1,1
######## SISUS_v01-07_PhillipsKoch2002_bears.xls :: sheet 6 ########
SOURCES.EFFICIENCY             not read
######## SISUS_v01-07_PhillipsKoch2002_bears.xls :: sheet 7 ########
LINEAR.CONSTRAINTS             not read
######## SISUS_v01-07_PhillipsKoch2002_bears.xls :: sheet 8 ########
PRIOR.DIRICHLET                not read
######## SISUS_v01-07_PhillipsKoch2002_bears.xls :: sheet 9 ########
MIXTURES.ISOTOPE.STDDEV        not read
######## SISUS_v01-07_PhillipsKoch2002_bears.xls :: sheet 10 ########
SOURCES.ISOTOPE.STDDEV         not read
######## SISUS_v01-07_PhillipsKoch2002_bears.xls :: sheet 11 ########
MIXTURES.CONCENTRATION.STDDEV  not read
######## SISUS_v01-07_PhillipsKoch2002_bears.xls :: sheet 12 ########
SOURCES.CONCENTRATION.STDDEV   not read
######## SISUS_v01-07_PhillipsKoch2002_bears.xls :: sheet 13 ########
MIXTURES.EFFICIENCY.STDDEV     not read
######## SISUS_v01-07_PhillipsKoch2002_bears.xls :: sheet 14 ########
SOURCES.EFFICIENCY.STDDEV      not read